DisGeNET - a database of gene-disease associations

List of associated variants

Post-Traumatic Stress Disorder, C0038436

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs9315202		0.925	0.080	13	33067879	downstream gene variant	C/T	snv		0.24	4
rs1800629	TNF	0.472	0.920	6	31575254	upstream gene variant	G/A	snv	0.12	0.14	169
rs16944	IL1B	0.531	0.920	2	112837290	upstream gene variant	A/G	snv		0.57	92
rs25531	SLC6A4 ; LOC105371720	0.581	0.520	17	30237328	upstream gene variant	T/C	snv		0.18	72
rs3091244	CRP	0.724	0.280	1	159714875	upstream gene variant	G/A;T	snv			17
rs2794520		0.807	0.240	1	159709026	upstream gene variant	C/A;T	snv			9
rs11178997	TPH2	0.827	0.040	12	71938373	upstream gene variant	T/A	snv		0.12	5
rs12364283	DRD2 ; LOC105369501	0.925	0.080	11	113476233	upstream gene variant	A/G	snv		5.8E-02	3
rs182455	STMN1 ; LOC105376885	0.925	0.120	1	25908492	upstream gene variant	A/G;T	snv			2
rs3100127		1.000	0.040	1	202191842	upstream gene variant	C/A;T	snv			1
rs2736100	TERT	0.550	0.880	5	1286401	3 prime UTR variant	C/A	snv		0.52	83
rs1205	CRP	0.602	0.680	1	159712443	3 prime UTR variant	C/T	snv		0.30	46
rs1130864	CRP	0.672	0.520	1	159713301	3 prime UTR variant	G/A	snv		0.26	27
rs3800373	LOC101929309 ; FKBP5	0.752	0.200	6	35574699	3 prime UTR variant	C/A	snv		0.68	22
rs4606	RGS2	0.752	0.120	1	192812042	3 prime UTR variant	C/G;T	snv			16
rs27072	SLC6A3	0.807	0.120	5	1394407	3 prime UTR variant	C/A;T	snv			11
rs28363170	SLC6A3	0.827	0.120	5	1393745	3 prime UTR variant	-/AGTGGGGGCCCTGCATGCGTCCTGGGGTAGTACACGCTCC	delins		8.1E-06	7
rs17759843	PPM1F	0.882	0.080	22	21920372	3 prime UTR variant	G/A	snv		6.7E-02	4
rs7208505	SKA2	1.000	0.040	17	59110368	3 prime UTR variant	G/A;C;T	snv			2
rs10144436	DICER1	1.000	0.040	14	95090065	3 prime UTR variant	C/A	snv		2.9E-02	1
rs2108977	TPH1	1.000	0.040	11	18019049	3 prime UTR variant	T/C	snv		0.47	1
rs9868039	DRD3	1.000	0.040	3	114127695	3 prime UTR variant	G/A;C	snv			1
rs6269	COMT ; MIR4761	0.827	0.240	22	19962429	5 prime UTR variant	A/G	snv		0.38	10
rs3749034	GAD1	0.827	0.040	2	170816965	5 prime UTR variant	G/A;T	snv			6
rs2400707	ADRB2	1.000	0.040	5	148825489	5 prime UTR variant	A/G;T	snv			3